Dear all, thank you very much for this great resource. I want to use SignatureAnalyzer in my analyses and was therefore going through the demo-run in `PCAWG7-data-preparation-version-1.5`. I have VCF files (with left-aligned/normalized indels) and want to transform these into .SIMPLE files. Could you please explain the steps to get VCF-like .simple files or direct to a file where this is already described? Thanks, Emre

Created by Emre Kocakavuk Emre_Kocakavuk
Emre, Just saw your query -- I suggest you do a google search for GitHub ICAMS -- The functionality should be more robust and will work on VCF files. If the functionality you need is not there we can probably add it. Apologies for the delay, Steve

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