tumor_XI065_SYN_NF_014_merged.mdup.bam
syn11888539
Created By
Xindi Guo xindi.guo
age: 10
sex: Female
Uuid: 0b2c2a5d-22c5-45a2-87d3-61f105dcb35f
assay: whole genome sequencing
organ: brain
tissue: primary tumor
ageUnit: years
runType: pairedEnd
species: Homo sapiens
studyId: syn5698493
cellType:
comments:
dataType: genomicVariants
entityId: syn11888539
platform: Illumina HiSeq X
readPair:
Component: GenomicsAssayTemplate
aliquotID:
diagnosis: Neurofibromatosis type 1
readDepth:
studyName: Synodos NF1 Low Grade Glioma
tumorType: Atypical Pilocytic Astrocytoma
fileFormat: bam
initiative: Synodos
isCellLine: No
isStranded: No
readLength: 151
specimenID: SYN_NF_014
dataSubtype: processed
libraryPrep:
nf1Genotype: -/-
nf2Genotype: Unknown
individualID: SYN_NF_014
resourceType: experimentalData
fundingAgency: CTF
isPrimaryCell: No
isMultiSpecimen: No
modelSystemName:
parentSpecimenID: SYN_NF_014
readStrandOrigin:
isMultiIndividual: No
nucleicAcidSource: bulk cell
dissociationMethod: none
readPairOrientation:
progressReportNumber: 6
libraryPreparationMethod: Illumina TruSeq DNA Nano
specimenPreparationMethod:
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