I've added instructions for testing your docker image locally [here.](https://www.synapse.org/#!Synapse:syn15589870/wiki/592701)
Created by Andrew Lamb andrewelamb Not sure why it's failing in the queue and not locally.
I suspect that error is from dealing with missing expression values. In dataset 1 I added some missing expression values. The leaderboard phase may have some datasets that don't have complete expression files across all genes/samples so we want docker images to be able to handle that. My docker keeps failing on your server and I am not sure why. When running it using docker run on my PC everything works fine.
A line of code is calculating average of (always) positive numbers. And in the logs I get from your server I see that sometimes it has the following nan value:
[[0.97572323 nan 1.00000002 0.7904222 ]
[1.00000001 1.00000002 1.06489024 1.00000002]]
without very detailed debugging it is hard for me to find out why (submitting and waiting for results takes a long time). Can you please assist?
Drop files to upload
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