CCDYYANXX_3_CGGCTATG-ATAGAGGC_2.fastq.gz
syn15590020
Created By
Kai Pollard mkai1
age: 18
sex: Female
assay: RNA-seq
tissue: primary tumor
ageUnit: years
runType: pairedEnd
species: Homo sapiens
studyId: syn4939902
bodyPart: Left Superior Mediastinum
comments: JH_batch1
dataType: geneExpression
platform: Illumina HiSeq 2500
readPair: 2
Component: RNASeqTemplate
aliquotID: 15C1D
diagnosis: Neurofibromatosis type 1
readDepth: 50M
studyName: The Johns Hopkins NF1 biospecimen repository
tumorType: Malignant Peripheral Nerve Sheath Tumor
accessType: PRIVATE
fileFormat: fastq
initiative: Open Proposal Program
isCellLine: No
isStranded: No
readLength: 151bp
specimenID: JH-2-016-4H597
dataSubtype: raw
libraryPrep: polyAselection
nf1Genotype: -/-
nf2Genotype: +/+
individualID: JH-2-016
resourceType: experimentalData
fundingAgency: NTAP
isPrimaryCell: Yes
sciDataRelease: FALSE
isMultiSpecimen: No
parentSpecimenID: JH-2-016_MPNST_PT
specimenIdSource: Biobank
isMultiIndividual: No
nucleicAcidSource: bulk cell
individualIdSource: NTAP Biobank
experimentalCondition: JH_batch1
libraryPreparationMethod: TruSeq
specimenPreparationMethod: Flash frozen
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