Just to be clear, is it allowed to use the** gene names** of the 84 _in-situ_ genes to do the subset selection? For example, one could perform some analysis on the scRNA-seq expression of those 84 genes, and identify a subset of 20/40/60 genes to use. I understand that we are not allowed to use the _in-situ_ data (the binary matrix & cell locations) for subset selection, my question is does that include the gene names?
Created by Aditya Pratapa aditya Dear Pablo,
Thank you for your response.
Hi Ehsan, yes you can use geometry.txt Hi Pablo,
Can we use from "geometry.txt" to predict the position in the embryo of the 1297 cells in our models?
Thanks,
Hi,
yes the same genes
thanks
P Related to the subsets, to predict the position in the embryo of the 1297 cells using the expression patterns,
do we have to use the same genes given in 20/40/60genes.csv files? Thank you for your quick response! You can use any information on the genes (including names) except the in situs
P
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