Hi, Thank you for your great work! How can I recreate the table that was used to create figure 3.a in the GLASS Consortium Nature publication? Specifically I am interested in which IDH-wt patients have 5' Flank mutation in TERT promoter (which requires according to the figure also the coverage at these positions) along with it's intersection with mutations in other genes. I've found the code in the GIT that is supposed to create the table. But the connection seems to be to a local SQL database when I need to query Synapse tables. How can I mimic the local connection on synapse? Or is there another way using Synapse Tables to do it? Thank you very much in advance, Kerem

Created by Kerem Wainer Katsir keremw
Thank you very much for your amazing work.
Unfortunately this is not currently a priority and not something that will be done in the near future.
Thank you, That could be great. It is a great work which provides amazing knowledge, but I've found it pretty sophisticated to download both tables and the scripts from the GIT that correspond to tables with different names or tables that are not present here. So that could be very helpful thank you.
I apologize the database server is currently not publicly accessible. If there is sufficient interest from the community this could be done in the long run.
I realized it is not possible via synapse. I am trying to download and recreate it myself using the scripts in the GIT.

Recreating the Table creating Figure 3.a from the "Longitudinal molecular trajectories of diffuse glioma in adults" paper page is loading…