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Exception in version check: HTTPSConnectionPool(host='raw.githubusercontent.com', port=443): Max retries exceeded with url: /Sage-Bionetworks/synapsePythonClient/master/synapseclient/synapsePythonClient (Caused by NewConnectionError(': Failed to establish a new connection: [Errno 11001] getaddrinfo failed'))
Welcome, !
Downloading [####################]100.00% 378.8kB/378.8kB (102.4kB/s) raw.png Done...
Downloading [####################]100.00% 769.0bytes/769.0bytes (374.9kB/s) instrument_instances.png Done...
Downloading [####################]100.00% 349.6kB/349.6kB (281.2kB/s) raw.png Done...
\ Downloaded 131.0MB (62.2kB/s)Traceback (most recent call last):
File "D:\anaconda3\lib\site-packages\urllib3\response.py", line 302, in _error_catcher
yield
File "D:\anaconda3\lib\site-packages\urllib3\response.py", line 384, in read
data = self._fp.read(amt)
File "D:\anaconda3\lib\http\client.py", line 457, in read
n = self.readinto(b)
File "D:\anaconda3\lib\http\client.py", line 501, in readinto
n = self.fp.readinto(b)
File "D:\anaconda3\lib\socket.py", line 589, in readinto
return self._sock.recv_into(b)
File "D:\anaconda3\lib\ssl.py", line 1071, in recv_into
return self.read(nbytes, buffer)
File "D:\anaconda3\lib\ssl.py", line 929, in read
return self._sslobj.read(len, buffer)
ConnectionResetError: [WinError 10054] The remote host forcibly closed an existing connection.?
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "D:\anaconda3\lib\site-packages\requests\models.py", line 753, in generate
for chunk in self.raw.stream(chunk_size, decode_content=True):
File "D:\anaconda3\lib\site-packages\urllib3\response.py", line 436, in stream
data = self.read(amt=amt, decode_content=decode_content)
File "D:\anaconda3\lib\site-packages\urllib3\response.py", line 401, in read
raise IncompleteRead(self._fp_bytes_read, self.length_remaining)
File "D:\anaconda3\lib\contextlib.py", line 130, in __exit__
self.gen.throw(type, value, traceback)
File "D:\anaconda3\lib\site-packages\urllib3\response.py", line 320, in _error_catcher
raise ProtocolError('Connection broken: %r' % e, e)
urllib3.exceptions.ProtocolError: ("Connection broken: ConnectionResetError(10054, 'The remote host forcibly closed an existing connection.?', None, 10054, None)", ConnectionResetError(10054, 'The remote host forcibly closed an existing connection.?', None, 10054, None))
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "D:\anaconda3\lib\site-packages\synapseutils\sync.py", line 259, in _sync_file
followLink=followLink,
File "D:\anaconda3\lib\site-packages\synapseclient\client.py", line 713, in get
return self._getWithEntityBundle(entityBundle=bundle, entity=entity, **kwargs)
File "D:\anaconda3\lib\site-packages\synapseclient\client.py", line 829, in _getWithEntityBundle
self._download_file_entity(downloadLocation, entity, ifcollision, submission)
File "D:\anaconda3\lib\site-packages\synapseclient\client.py", line 891, in _download_file_entity
downloadPath = self._downloadFileHandle(entity.dataFileHandleId, objectId, objectType, downloadPath)
File "D:\anaconda3\lib\site-packages\synapseclient\client.py", line 1840, in _downloadFileHandle
expected_md5=fileHandle.get('contentMd5'))
File "D:\anaconda3\lib\site-packages\synapseclient\client.py", line 1881, in _download_from_url_multi_threaded
multithread_download.download_file(self, request)
File "D:\anaconda3\lib\site-packages\synapseclient\core\multithread_download\download_threads.py", line 232, in download_file
downloader.download_file(download_request)
File "D:\anaconda3\lib\site-packages\synapseclient\core\multithread_download\download_threads.py", line 297, in download_file
self._write_chunks(request, completed_futures, transfer_status)
File "D:\anaconda3\lib\site-packages\synapseclient\core\multithread_download\download_threads.py", line 372, in _write_chunks
chunk_data = chunk_response.content
File "D:\anaconda3\lib\site-packages\requests\models.py", line 831, in content
self._content = b''.join(self.iter_content(CONTENT_CHUNK_SIZE)) or b''
File "D:\anaconda3\lib\site-packages\requests\models.py", line 756, in generate
raise ChunkedEncodingError(e)
requests.exceptions.ChunkedEncodingError: ("Connection broken: ConnectionResetError(10054, 'The remote host forcibly closed an existing connection.?', None, 10054, None)", ConnectionResetError(10054, 'The remote host forcibly closed an existing connection.?', None, 10054, None))
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "zhangliang.py", line 37, in
download_data(email, password, local_folder, proj_id)
File "zhangliang.py", line 28, in download_data
all_files = synapseutils.syncFromSynapse(syn, entity=project_id, path=local_folder)
File "D:\anaconda3\lib\site-packages\synapseutils\sync.py", line 96, in syncFromSynapse
files = sync_from_synapse.sync(entity, path, ifcollision, followLink)
File "D:\anaconda3\lib\site-packages\synapseutils\sync.py", line 228, in sync
root_folder_sync = self._sync_root(entity, path, ifcollision, followLink, progress)
File "D:\anaconda3\lib\site-packages\synapseutils\sync.py", line 305, in _sync_root
raise ValueError("File download failed during sync") from exception
ValueError: File download failed during sync