title: Longboard project: [3/3-Schizophrenia Genetics and Brain Somatic Mosaicism](/Explore/Projects/DetailsPage?id=syn21895550) toolLink: [GitHub](https://github.com/PatrickJReed/Longboard) toolName: Longboard contributor: Fred Gage institution: Salk Institute for Biological Studies institutions: Salk Institute for Biological Studies projectTitle: 3/3-Schizophrenia Genetics and Brain Somatic Mosaicism projectEntity: syn21895550 toolDescription: A method for the identification of somatic retro-transposition events using convolutional neural networks. Longboard is an scalable, cloud based deep learning pipeline for the detection of somatic LINE-1 retrotransposition events from SLAV-Seq datasets. Longboard takes SLAV-Seq bam file(s) aligned to Hs37d5 as input and returns a vcf formated file of predicted somatic insertions.