PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_UMB5342.bam
syn22311121
Created By
Judson Belmont jmb
assay: scrnaSeq
grant: R01MH109715
organ: brain
study: IsoHuB
tissue: dorsolateral prefrontal cortex
SC_Bulk: TRUE
passage:
runType: pairedEnd
sc_bulk: TRUE
species: Human
dataType: geneExpression
organRIN: 8.0
platform: NextSeq500
rnaBatch: B
libraryID: PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_UMB5342
consortium: PEC
fileFormat: bam
isStranded: true
medianUMIs: 2,257
readLength: 2x100
specimenID: UMB5342_DLPFC
totalReads: 837,559,205
dataSubtype: processed
libraryPrep: polyAselection
medianGenes: 1,478
numberCells: 14,259
organWeight:
BrodmannArea: BA9
analysisType: Sequence alignment
individualID: UMB5342
libraryBatch: B
metadataType:
referenceSet: GRCh38
resourceType: experimentalData
isMultiSpecimen: FALSE
sequencingBatch: B
readStrandOrigin:
isMultiIndividual: FALSE
nucleicAcidSource: single nucleus
validBarcodeReads: 804056836
reprogrammedCellType:
libraryPreparationMethod: 10x
terminalDifferentiationPoint:
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