PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_HSB189.bam
syn22311133
Created By
Judson Belmont jmb
assay: scrnaSeq
grant: R01MH109715
organ: brain
study: IsoHuB
tissue: dorsolateral prefrontal cortex
SC_Bulk: TRUE
passage:
runType: pairedEnd
sc_bulk: TRUE
species: Human
dataType: geneExpression
organRIN: 8.9
platform: NextSeq500
rnaBatch: A
libraryID: PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_HSB189
consortium: PEC
fileFormat: bam
isStranded: true
medianUMIs: 6,174
readLength: 2x100
specimenID: HSB189_DLPFC
totalReads: 504,269,469
dataSubtype: processed
libraryPrep: polyAselection
medianGenes: 2,632
numberCells: 9,649
organWeight:
BrodmannArea:
analysisType: Sequence alignment
individualID: HSB189
libraryBatch: A
metadataType:
referenceSet: GRCh38
resourceType: experimentalData
isMultiSpecimen: FALSE
sequencingBatch: A
readStrandOrigin:
isMultiIndividual: FALSE
nucleicAcidSource: single nucleus
validBarcodeReads: 491662732
reprogrammedCellType:
libraryPreparationMethod: 10x
terminalDifferentiationPoint:
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