PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_UMB5168.bam

syn22311164

Created By Judson Belmont jmb

assay: scrnaSeq
grant: R01MH109715
organ: brain
study: IsoHuB
tissue: dorsolateral prefrontal cortex
SC_Bulk: TRUE
passage:
runType: pairedEnd
sc_bulk: TRUE
species: Human
dataType: geneExpression
organRIN: 7.9
platform: NextSeq500
rnaBatch: C
libraryID: PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_UMB5168
consortium: PEC
fileFormat: bam
isStranded: true
medianUMIs: 4,421
readLength: 2x100
specimenID: UMB5168_DLPFC
totalReads: 1,019,177,415
dataSubtype: processed
libraryPrep: polyAselection
medianGenes: 2,484
numberCells: 15,192
organWeight:
BrodmannArea: BA9
analysisType: Sequence alignment
individualID: UMB5168
libraryBatch: C
metadataType:
referenceSet: GRCh38
resourceType: experimentalData
isMultiSpecimen: FALSE
sequencingBatch: B
readStrandOrigin:
isMultiIndividual: FALSE
nucleicAcidSource: single nucleus
validBarcodeReads: 999813044
reprogrammedCellType:
libraryPreparationMethod: 10x
terminalDifferentiationPoint:

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