PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_UMB5376.bam
syn22311167
Created By
Judson Belmont jmb
assay: scrnaSeq
grant: R01MH109715
organ: brain
study: IsoHuB
tissue: dorsolateral prefrontal cortex
SC_Bulk: FALSE
passage:
runType: pairedEnd
sc_bulk: FALSE
species: Human
dataType: geneExpression
organRIN: 8.7
platform: NextSeq500
rnaBatch: D
libraryID: PEC_CTL_IsoHuB_DLPFC_snRNASeq_NextSeq500_UMB5376
consortium: PEC
fileFormat: bam
isStranded: true
medianUMIs: 9,144
readLength: 2x100
specimenID: UMB5376_DLPFC
totalReads: 704,884,210
dataSubtype: processed
libraryPrep: polyAselection
medianGenes: 3,780
numberCells: 6,132
organWeight:
BrodmannArea: BA9
analysisType: Sequence alignment
individualID: UMB5376
libraryBatch: D
metadataType:
referenceSet: GRCh38
resourceType: experimentalData
isMultiSpecimen: FALSE
sequencingBatch: B
readStrandOrigin:
isMultiIndividual: FALSE
nucleicAcidSource: single nucleus
validBarcodeReads: 685852336
reprogrammedCellType:
libraryPreparationMethod: 10x
terminalDifferentiationPoint:
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