Hi, In the following six dataset pulls, the middle two fail due to permissions errors, but the first and last two are able to be pulled without issue: cnf_data_resource = syn.tableQuery("SELECT * FROM syn21222341").asDataFrame() synodos_nf2 = syn.tableQuery("SELECT * FROM syn21520573").asDataFrame() synodos_nf1 = syn.tableQuery("SELECT * FROM syn21520550").asDataFrame() jhu_biobank = syn.tableQuery("SELECT * FROM syn20812185").asDataFrame() nf1_glioma = syn.tableQuery("SELECT * FROM syn21521726").asDataFrame() pnf_cell_line = syn.tableQuery("SELECT * FROM syn22351884").asDataFrame() I'm wondering if the synodos_nf1 and jhu_biobank have more restrictive permissions?

Created by Darren Peters dumbledorf
Hi @dumbledorf, Can you please request access for the CTF Cutaneous NF Resource on this page: https://www.synapse.org/#!Synapse:syn22336443/wiki/605246 to make sure you have the correct access permissions to the WGS dataset? Please let me know if you have any questions. Thanks, Jineta
Thanks @jineta.banerjee , I can confirm the synodos_nf1 dataset is available now. Can you comment on the following? Getting unauthorized exceptions when I try the WGS data for cNFs: genes_with_meta = syn.tableQuery("SELECT * FROM syn20551862").asDataFrame()
Hi @dumbledorf, Thanks for checking out these datasets. Yes, the JHU Biobank dataset does have additional access requirements. Please see "A Nerve Sheath Tumor Bank from Patients with NF1" here: https://www.synapse.org/#!Synapse:syn22336443/wiki/605246 The synodos_nf1 dataset is public. The appropriate access conditions have been updated and it should be available for download now. Thanks, Jineta

synodos_nf1 and jhu_biobank datasets might have different permissions than the rest page is loading…