SC11-003B.133.1.6 Insertions

syn2247336

Created By Larsson Omberg larssono

DOI: 10.1182/blood-2013-02-484444
UID: SC11-003B.133.1.6
run: 133
Race: White
lane: 1
index: 6.0
Gender: female
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: true
Donor_ID: D001
Genotype: not determined
ThawDate: 7/27/2011
dataType: mRNA
fileType: bed
Cell_Type: PSC
Ethnicity: unknown
Pubmed_ID: PMC3778548
Replicate: B
SampleType: iPSC
XIST_Level: low
donor_info: same donor
fileSubType: insertions
mappedReads: 1.5101612E7
numberReads: 1.7645645E7
Host_Species: human
PassageAtThaw: 21.0
percentMapped: 0.8558265793061121
Cell_Line_Type: iPSC
Diffname_short: SC
C4_Cell_Line_ID: SC11-003
Donor_Cell_Link: http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=GM00969&PgId=166
Donor_Phenotype: unknown
Originating_Lab: Gadue, French, & Weiss
Small_Molecules: unknown
XIST_Expression: 1.3682700669999999
DateDNAExtracted: 3/22/2012
DateDNAHarvested: 8/31/2011
DateRNAHarvested: 8/31/2011
Donor_Life_Stage: childhood
PassageAtHarvest: 25.0
Tissue_of_Origin: skin
DatemRNAExtracted: 9/13/2011
Culture_Conditions: Cre-excised
DatemiRNAextracted: 9/13/2011
Originating_Lab_ID: CHOP_WT1.2
biosampleAccession: SAMN05559158
C4_Karyotype_Result: abnormal
Cell_Type_of_Origin: fibroblast
PCBC_Cell_Line_Name: PCBC01hsi2011070102
PassageAtDNAHarvest: 25.0
SampleTypeIncomplete: iPSC
biologicalSampleName: SC11-003B
DateDNASubmittedToCore: 4/5/2012
DateRNASubmittedtoCore: 3/13/2012
High_Confidence_Donor_ID: D001
Reprogramming_Vector_Type: lentivirus
Cell_Type_of_Origin_Level2: fibroblast
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM
Reprogramming_Vector_Type_Level2: integrating
Other_Conditions_During_Reprogramming: unknown
Other_Significant_Contributors_to_line_generation: Jason A Mills

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