SC11-006A.119.1.4 Exon Coverage

syn2247434

Created By Larsson Omberg larssono

DOI: 10.1182/blood-2013-02-484444
UID: SC11-006A.119.1.4
run: 119
Race: unknown
lane: 1
Notes: resubmitted for miRNA on 7/24/12
index: 4.0
Gender: male
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: true
Donor_ID: D002
Genotype: not determined
ThawDate: 8/2/2011
dataType: mRNA
fileType: bed
Cell_Type: PSC
Ethnicity: Hispanic or Latino
Pubmed_ID: PMC3778548
Replicate: A
SampleType: iPSC
XIST_Level: low
fileSubType: exons
mappedReads: 1.3497143E7
numberReads: 1.538736E7
Host_Species: human
PassageAtThaw: 19.0
percentMapped: 0.877157810046688
Cell_Line_Type: iPSC
Diffname_short: SC
C4_Cell_Line_ID: SC11-006
Donor_Cell_Link: http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=GM05565&PgId=166
Donor_Phenotype: unknown
Originating_Lab: Gadue, French, & Weiss
Small_Molecules: unknown
XIST_Expression: 0.32838650199999997
DateDNAExtracted: 9/13/2011
DateDNAHarvested: 8/15/2011
DateRNAHarvested: 8/15/2011
Donor_Life_Stage: childhood
PassageAtHarvest: 21.0
Tissue_of_Origin: skin
DatemRNAExtracted: 8/22/2011
Culture_Conditions: Cre-excised
DatemiRNAextracted: 8/22/2011
Originating_Lab_ID: CHOP_WT2.2
biosampleAccession: SAMN05559164
C4_Karyotype_Result: normal
Cell_Type_of_Origin: fibroblast
PCBC_Cell_Line_Name: PCBC01hsi2011070105
PassageAtDNAHarvest: 21.0
SampleTypeIncomplete: iPSC
biologicalSampleName: SC11-006A
DateDNASubmittedToCore: 9/30/2011
DateRNASubmittedtoCore: 12/28/2011
High_Confidence_Donor_ID: D002
Reprogramming_Vector_Type: lentivirus
Cell_Type_of_Origin_Level2: fibroblast
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM
Reprogramming_Vector_Type_Level2: integrating
Other_Conditions_During_Reprogramming: unknown
Other_Significant_Contributors_to_line_generation: Jason A Mills

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