SC11-008AEB.133.3.15 Deletions

syn2247541

Created By Larsson Omberg larssono

DOI: 10.1371/journal.pone.0018293
UID: SC11-008AEB.133.3.15
run: 133
Race: unknown
lane: 3
index: 15.0
Gender: female
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: true
Donor_ID: D003
Genotype: not determined
ThawDate: 9/16/2011
dataType: mRNA
fileType: bed
Cell_Type: PSC
Ethnicity: unknown
Pubmed_ID: PMC3072973
Replicate: A
SampleType: EB
XIST_Level: low
fileSubType: deletions
mappedReads: 1.7338444E7
numberReads: 2.1399795E7
Host_Species: human
PassageAtThaw: 18.0
percentMapped: 0.8102154249608471
Cell_Line_Type: iPSC
Diffname_short: EB
C4_Cell_Line_ID: SC11-008
Donor_Phenotype: unknown
Originating_Lab: Zambidis
Small_Molecules: unknown
XIST_Expression: 0.730935067
DateRNAHarvested: 12/1/2011
Donor_Life_Stage: newborn
PassageAtHarvest: 30.0
Tissue_of_Origin: umbilical cord blood
DatemRNAExtracted: 2/1/2012
Culture_Conditions: Stromal primed
DatemiRNAextracted: 2/1/2012
Originating_Lab_ID: CBiPS-6.2
biosampleAccession: SAMN05559178
C4_Karyotype_Result: normal
Cell_Type_of_Origin: CD34+ cells
PCBC_Cell_Line_Name: PCBC03hsi2011080401
SampleTypeIncomplete: EB
biologicalSampleName: SC11-008AEB
DateRNASubmittedtoCore: 2/10/2012
High_Confidence_Donor_ID: D003
Reprogramming_Vector_Type: plasmid
Cell_Type_of_Origin_Level2: blood
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM-NLT
Reprogramming_Vector_Type_Level2: nonintegrating
Other_Conditions_During_Reprogramming: unknown

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