SC11-010AEB.133.3.19 Deletions

syn2248850

Created By Larsson Omberg larssono

DOI: 10.1371/journal.pone.0018293
UID: SC11-010AEB.133.3.19
run: 133
Race: unknown
lane: 3
index: 19.0
Gender: female
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: false
Donor_ID: D003
Genotype: not determined
ThawDate: 9/16/2011
dataType: mRNA
fileType: bed
Cell_Type: PSC
Ethnicity: unknown
Pubmed_ID: PMC3072973
Replicate: A
SampleType: EB
XIST_Level: high
fileSubType: deletions
mappedReads: 1.0773032E7
numberReads: 1.3445103E7
Host_Species: human
PassageAtThaw: 12.0
percentMapped: 0.8012606522984609
Cell_Line_Type: iPSC
Diffname_short: EB
C4_Cell_Line_ID: SC11-010
Donor_Phenotype: unknown
Originating_Lab: Zambidis
Small_Molecules: unknown
XIST_Expression: 486.63112429999995
DateRNAHarvested: 12/5/2011
Donor_Life_Stage: newborn
PassageAtHarvest: 24.0
Tissue_of_Origin: umbilical cord blood
DatemRNAExtracted: 2/1/2012
Culture_Conditions: Stromal primed
DatemiRNAextracted: 2/1/2012
Originating_Lab_ID: CBiPS-6.13
biosampleAccession: SAMN05559193
C4_Karyotype_Result: normal
Cell_Type_of_Origin: CD34+ cells
PCBC_Cell_Line_Name: PCBC03hsi2011080403
SampleTypeIncomplete: EB
biologicalSampleName: SC11-010AEB
DateRNASubmittedtoCore: 2/10/2012
High_Confidence_Donor_ID: D003
Reprogramming_Vector_Type: plasmid
Cell_Type_of_Origin_Level2: blood
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM-NLT
Reprogramming_Vector_Type_Level2: nonintegrating
Other_Conditions_During_Reprogramming: unknown

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