SC11-010DE.134.5.19.bam

syn2248996

Created By Larsson Omberg larssono

DOI: 10.1371/journal.pone.0018293
UID: SC11-010DE.134.5.19
run: 134
Race: unknown
lane: 5
index: 19.0
Gender: female
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: true
Donor_ID: D003
Genotype: not determined
ThawDate: 2/1/2012
dataType: mRNA
fileType: bam
Cell_Type: PSC
Ethnicity: unknown
Pubmed_ID: PMC3072973
SampleType: DE
XIST_Level: high
fileSubType: mapped
mappedReads: 5.5720587E7
numberReads: 6.5300043E7
Host_Species: human
PassageAtThaw: 17.0
percentMapped: 0.853300923553756
Cell_Line_Type: iPSC
Diffname_short: DE
C4_Cell_Line_ID: SC11-010
Donor_Phenotype: unknown
Originating_Lab: Zambidis
Small_Molecules: unknown
XIST_Expression: 486.63112429999995
DateRNAHarvested: 2/27/2012
Donor_Life_Stage: newborn
PassageAtHarvest: 20.0
Tissue_of_Origin: umbilical cord blood
DatemRNAExtracted: 3/15/2012
Culture_Conditions: Stromal primed
DatemiRNAextracted: 3/15/2012
Originating_Lab_ID: CBiPS-6.13
biosampleAccession: SAMN05559196
C4_Karyotype_Result: normal
Cell_Type_of_Origin: CD34+ cells
PCBC_Cell_Line_Name: PCBC03hsi2011080403
SampleTypeIncomplete: DE
biologicalSampleName: SC11-010DE
DateRNASubmittedtoCore: 3/15/2012
High_Confidence_Donor_ID: D003
Reprogramming_Vector_Type: plasmid
Cell_Type_of_Origin_Level2: blood
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM-NLT
Reprogramming_Vector_Type_Level2: nonintegrating
Other_Conditions_During_Reprogramming: unknown

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