SC11-013A.149.5.21 Insertions

syn2250202

Created By Larsson Omberg larssono

DOI: 10.1371/journal.pone.0042838
UID: SC11-013A.149.5.21
run: 149
Race: unknown
lane: 5
index: 21.0
Gender: female
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: true
Donor_ID: D013
Genotype: not determined
ThawDate: 2/1/2012
dataType: mRNA
fileType: bed
Cell_Type: PSC
Ethnicity: unknown
Pubmed_ID: PMC3414503
Replicate: A
SampleType: iPSC
XIST_Level: high
fileSubType: insertions
mappedReads: 1.9548327E7
numberReads: 2.3562901E7
Host_Species: human
PassageAtThaw: 17.0
percentMapped: 0.8296231011622891
Cell_Line_Type: iPSC
Diffname_short: SC
ReplicateNotes: R
C4_Cell_Line_ID: SC11-013
Donor_Phenotype: unknown
Originating_Lab: Zambidis
Small_Molecules: unknown
XIST_Expression: 112.44888519999999
DateDNAExtracted: 7/18/2012
DateDNAHarvested: 2/17/2012
DateRNAHarvested: 2/17/2012
Donor_Life_Stage: newborn
PassageAtHarvest: 19.0
Tissue_of_Origin: umbilical cord blood
DatemRNAExtracted: 6/21/2012
Culture_Conditions: Stromal primed
DatemiRNAextracted: 6/21/2012
Originating_Lab_ID: CBiPS-E17C6
biosampleAccession: SAMN05559203
C4_Karyotype_Result: normal
Cell_Type_of_Origin: CD34+ cells
PCBC_Cell_Line_Name: PCBC03hsi2011080406
PassageAtDNAHarvest: 19.0
SampleTypeIncomplete: iPSC
biologicalSampleName: SC11-013A
DateDNASubmittedToCore: 7/24/2012
DateRNASubmittedtoCore: 8/1/2012
High_Confidence_Donor_ID: D013
Reprogramming_Vector_Type: plasmid
Cell_Type_of_Origin_Level2: blood
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM
Reprogramming_Vector_Type_Level2: nonintegrating
Other_Conditions_During_Reprogramming: unknown
Other_Significant_Contributors_to_line_generation: Tea Soon Park

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