SC12-019.181.7.2_isoform.fpkm_tracking

syn2252039

Created By Larsson Omberg larssono

UID: SC12-019.181.7.2
run: 181
Race: unknown
lane: 7
Notes: 2/4/13 dna again
index: 2.0
Gender: male
center: C4
public: true
Disease: unknown
exclude: false
pass_qc: true
Donor_ID: D006
Genotype: not determined
ThawDate: 11/6/2012
dataType: mRNA
fileType: fpkm
Cell_Type: PSC
Ethnicity: unknown
SampleType: iPSC
XIST_Level: low
fileSubType: isoform
mappedReads: 2.0508822E7
numberReads: 2.2377878E7
Host_Species: human
PassageAtThaw: 16.0
percentMapped: 0.916477514087797
Cell_Line_Type: iPSC
Diffname_short: SC
C4_Cell_Line_ID: SC12-019
Donor_Phenotype: unknown
Originating_Lab: Torok-Storb
Small_Molecules: Na-butyrate and SAHA
XIST_Expression: 1.1813855659999999
DateRNAHarvested: 11/25/2012
Donor_Life_Stage: newborn
PassageAtHarvest: 19.0
Tissue_of_Origin: foreskin
DatemRNAExtracted: 1/4/2013
Culture_Conditions: Standard: TESR1 + Matrigel or KOSR + MEFs
Originating_Lab_ID: HFF12
PassageAtThawNotes: live P16
C4_Karyotype_Result: normal
Cell_Line_of_Origin: HFF-1 ATCC
Cell_Type_of_Origin: fibroblast
PCBC_Cell_Line_Name: PCBC05hsi2012061401
SampleTypeIncomplete: iPSC
biologicalSampleName: SC12-019
DateRNASubmittedtoCore: 2/12/2013
High_Confidence_Donor_ID: D006
Reprogramming_Vector_Type: retrovirus
Cell_Type_of_Origin_Level2: fibroblast
Donor_ID_is_High_Confidence: true
Reprogramming_Gene_Combination: OSKM
Reprogramming_Vector_Type_Level2: integrating
Other_Conditions_During_Reprogramming: hypoxia
Other_Significant_Contributors_to_line_generation: Aravind Ramakrishnan

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