HFYWHDSXY_CATATTGGAG-TACGGTATTC_L003_R1.fastq.gz
syn23569872
Created By
zhouzhaohe
age: 10
sex: Female
assay: RNA-seq
tissue: xenograft passage
ageUnit: years
runType: pairedEnd
species: Homo sapiens
studyId: syn4939902
bodyPart: Scalp
comments: Scalp
dataType: geneExpression
platform: Illumina NovaSeq 6000
readPair: 1
Component: RNASeqTemplate
aliquotID: 6G883
diagnosis: Neurofibromatosis type 1
readDepth: 41M_read pairs
studyName: The Johns Hopkins NF1 biospecimen repository
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: fastq
initiative: Open Proposal Program
isCellLine: No
isStranded: Yes
readLength: 151
specimenID: JH-2-055-9F5F3
dataSubtype: raw
libraryPrep: polyAselection
nf1Genotype: -/-
individualID: JH-2-055
resourceType: experimentalData
fundingAgency: NTAP
isPrimaryCell: Yes
parentSpecimenID: JH-2-055-b_MPNST_Xeno
readStrandOrigin: forward
nucleicAcidSource: bulk cell
dissociationMethod: mechanical
readPairOrientation: fr-firststrand
experimentalCondition: WU_batch1
libraryPreparationMethod: TruSeq
specimenPreparationMethod: Viably frozen
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