HFYWHDSXY_CGGTCTTACG-GATCCTCTCG_L003_R1.fastq.gz
syn23569884
Created By
zhouzhaohe
age: 16
sex: Male
assay: RNA-seq
tissue: primary tumor
ageUnit: years
runType: pairedEnd
species: Homo sapiens
studyId: syn4939902
bodyPart: Right Liver
comments: Right Liver
dataType: geneExpression
platform: Illumina NovaSeq 6000
readPair: 1
Component: RNASeqTemplate
aliquotID: B6471
diagnosis: Neurofibromatosis type 1
readDepth: 40M_read pairs
studyName: The Johns Hopkins NF1 biospecimen repository
tumorType: Plexiform Neurofibroma
fileFormat: fastq
initiative: Open Proposal Program
isCellLine: No
isStranded: Yes
readLength: 151
specimenID: JH-2-084-AE169
dataSubtype: raw
libraryPrep: polyAselection
nf1Genotype: +/-
individualID: JH-2-084
resourceType: experimentalData
fundingAgency: NTAP
isPrimaryCell: Yes
parentSpecimenID: JH-2-084_PN_PT
readStrandOrigin: forward
nucleicAcidSource: bulk cell
dissociationMethod: mechanical
readPairOrientation: fr-firststrand
experimentalCondition: WU_batch1
libraryPreparationMethod: TruSeq
specimenPreparationMethod: Flash frozen
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