1423NeuNPos-Nurr1Pos_ACAGTG_HT3KGDSXX_L001_001_R2.fastq.gz
syn24193138
Created By
Hyejung Won hwon
assay: HI-C
grant: U01DA048279
organ: brain
study: Midbrain Genomics
tissue: midbrain
runType: pairedEnd
species: Human
cellType: dopaminergic neurons
dataType: chromatinActivity
platform: IlluminaNovaseq6000
pcrCycles: 14
consortium: PEC
fileFormat: fastq
readLength: 300-500bp
specimenID: DA1423
totalReads: 546398290
dataSubtype: raw
libraryPrep: DNALibraryConstruction
individualID: 1423
libraryBatch: 2
metadataType:
referenceSet: GRCh37
resourceType: experimentalData
isMultiSpecimen: false
sequencingBatch: 1
validHiCContacts: 107601113
isMultiIndividual: false
nucleicAcidSource: sorted nuclei
libraryPreparationMethod: TruSeq
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