2-055_pdx.TGCGGCGTAT-ACCCTCGGTA.HNJG2DSXY_TGCGGCGTAT-ACCCTCGGTA_L001_R1.fastq.gz
syn25176274
Created By
Kuangying Yang kuangyingyang
age:
sex: Female
Uuid: 0d808e9b-4ffc-4a67-a768-edd2a5357255
assay:
organ:
tissue: PDX tissue
ageUnit:
runType: pairedEnd
species: Homo sapiens
studyId: syn21984813
cellType:
comments:
dataType: geneExpression
entityId: syn25176274
platform:
readPair: 150
Component: RNASeqTemplate
aliquotID:
diagnosis: Neurofibromatosis type 1
readDepth:
studyName: Predictive Modeling Utilizing a Preclinical NF1-MPNST Platform Suitable for Precision Oncology
tumorType:
consortium: NFRI
fileFormat: fastq
initiative: MPNST Patient-Derived Model Centers
isCellLine: No
isStranded: Yes
readLength: 151
specimenID: 2-055_pdx
dataSubtype: raw
isXenograft: TRUE
libraryPrep: rRNAdepletion
nf1Genotype: -/-
nf2Genotype: +/+
targetDepth:
individualID: JH-2-055
resourceType: experimentalData
fundingAgency: NFRI,NIH-NCI
isPrimaryCell: No
isMultiSpecimen: No
modelSystemName:
parentSpecimenID: JH-2-055_MPNST_PDX
readStrandOrigin: Reverse
isMultiIndividual: No
nucleicAcidSource: bulk cell
dissociationMethod: none
readPairOrientation:
progressReportNumber:
experimentalCondition: pdx
libraryPreparationMethod:
specimenPreparationMethod: Flash frozen
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