Hello, I have downloaded the .bam files from https://doi.org/10.7303/syn4164376 and wish to quantify them using SALMON; however, they do not seem to map to the GENCODE hg19 release 14 reference transcript fasta file as written in https://adknowledgeportal.synapse.org/Explore/Studies/DetailsPage/StudyDetails?Study=syn3219045. May I ask how these .bam files were generated with what mapping reference/tools used? Thanks!