syn52335508

Dear team, In the captioned folder related to the multiome data from MIT-ROSMAP, the index file for the fragments.tsv seems to be missing. Typically, it should be something like fragments.tsv.tbi.gz. Can you help me how to access these files? Thanks. Best regards, Rajesh

Created by rrajesh
Dear team, Also, in addition the message above, the count matrix file is available only for the multiome studies. This file would be similar to the one available in the SEA-AD multiome data such as syn31121287. As such, Cellranger should output the count file, fragments and fragments index file for both snATAC-seq and multiome data. Do you think it is possible to make the count matrix file available for AMP-AD_Diverse Cohorts, MIT-ROSMAP and SEA-AD studies. Thanks. Best regards, Rajesh

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Dear team, In the captioned folder related to the multiome data from MIT-ROSMAP, the index file for the fragments.tsv seems to be missing. Typically, it should be something like fragments.tsv.tbi.gz. Can you help me how to access these files? Thanks. Best regards, Rajesh

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