pri-miRNA/pre-miRNA calling from RNAseq data of AMP-AD

Hi all, About the RNAseq dataset in AMP-AD project, the length of all fragment reads is 101bp. Is it worthy to do pri-miRNA/pre-miRNA calling? Thanks

Created by Min Tang boymin2020
@Mette Thanks for the reply. We also confirmed that.
Are you referring to the RNAseq coming from the MayoRNAseq, MSBB, and ROSMAP studies? If so, the RNA sequencing for those studies was not optimized for miRNA, i.e. size selection of the RNA may have resulted in limited ability of detecting miRNA

Your web browser must have JavaScript enabled in order for this application to display correctly.
If you are an automated web crawler from a search engine, follow this AJAX application crawl link

Hi all, About the RNAseq dataset in AMP-AD project, the length of all fragment reads is 101bp. Is it worthy to do pri-miRNA/pre-miRNA calling? Thanks

Drop files to upload

pri-miRNA/pre-miRNA calling from RNAseq data of AMP-AD page is loading…