We received the error: "Your submission (id: 9726307) is invalid, below are the invalid reasons:"
But the same image was ACCEPTED and VALIDATED in Fast Lane without error.
log file error=ERROR:toil.worker:Exiting the worker because of a failed job on host 02420d0d18ee
Created by Milad Norouzi Milad_Norouzi Thank you
Hi @Milad_Norouzi,
Because sequence variants are specific to a study. None will be shared between the training and validation data.
Tomiko on behalf of the 'Preterm Birth Prediction - Microbiome DREAM Challenge' team
So why this problem does not exist in fast lane and we see the print of dimension of related data "300 8511"
sv = as.data.frame(read.csv(file.path(opt$input, "/sv_counts/sp_sv_long.csv")))
sv = sv[,c(2,3,6)]
sv = spread(sv, sv, fract,fill = 0)
print(dim(sv))
thank you @Milad_Norouzi ,
Submission ID 9726307 received the following error:
```
Error in `spread()`:
! Each row of output must be identified by a unique combination of keys.
Keys are shared for 653 rows:
* 2811, 2828
* 3103, 3199
...
...
```
Hope this helps!