I am grateful to the scientists of the AMP Lupas project for sharing their excellent dataset. However, unfortunately, one of their FASTQ files (syn26311302) appears to be corrupted. I downloaded this file and its checksum was OK, but gunzip encountered an ?unexpected end of file?. I would appreciate it if they could replace the file with an intact one.
Created by Masashi Fujita masashi @masashi,
Thank you for bringing this to our attention. I can confirm that the specified fastq.gz file is corrupted. We are working with the original data contributors to try and replace with an intact copy of the file. In the meantime, we will be removing the affected library from the AMP-RA_CEL-Seq dataset.