Hi,
I tried to submit the results for the validation dataset, but the results are all 0.
Then I checked the log file, and it was like this.
Any reason why I failed to get any results?
Thanks a lot.
STDERR: 2022-07-08T20:04:32.477619755Z e11a4c94c91f 2022-07-08 20:04:32,477 MainThread INFO cwltool: Resolved '/var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/validation-phase-workflow.cwl' to 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/validation-phase-workflow.cwl'
STDERR: 2022-07-08T20:04:35.378427827Z e11a4c94c91f 2022-07-08 20:04:35,378 MainThread WARNING cwltool: Workflow checker warning:
STDERR: 2022-07-08T20:04:35.378453536Z brats-dream-challenge-infra-main/validation-phase-workflow.cwl:55:9: Source 'filepath' of type
STDERR: 2022-07-08T20:04:35.378456408Z ["null", "File"] may be
STDERR: 2022-07-08T20:04:35.378459081Z incompatible
STDERR: 2022-07-08T20:04:35.378461489Z brats-dream-challenge-infra-main/validation-phase-workflow.cwl:135:9: with sink 'input_file' of
STDERR: 2022-07-08T20:04:35.378463768Z type "File"
STDERR: 2022-07-08T20:04:35.378466375Z brats-dream-challenge-infra-main/validation-phase-workflow.cwl:55:9: Source 'filepath' of type
STDERR: 2022-07-08T20:04:35.378468472Z ["null", "File"] may be
STDERR: 2022-07-08T20:04:35.378470711Z incompatible
STDERR: 2022-07-08T20:04:35.378472848Z brats-dream-challenge-infra-main/validation-phase-workflow.cwl:75:9: with sink 'input_file' of
STDERR: 2022-07-08T20:04:35.378475048Z type "File"
STDERR: 2022-07-08T20:04:36.589890821Z e11a4c94c91f 2022-07-08 20:04:36,589 MainThread INFO toil: Running Toil version 4.1.0-5ad5e77d98e1456b4f70f5b00e688a43cdce2ebe.
STDERR: 2022-07-08T20:04:37.208635992Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpmgqkuoso/worker_log.txt
STDERR: 2022-07-08T20:04:37.444211885Z e11a4c94c91f 2022-07-08 20:04:37,443 MainThread INFO toil.leader: 0 jobs are running, 0 jobs are issued and waiting to run
STDERR: 2022-07-08T20:04:37.444826204Z e11a4c94c91f 2022-07-08 20:04:37,444 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-7ycdzvrd with job batch system ID: 1 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:37.444895964Z e11a4c94c91f 2022-07-08 20:04:37,444 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/set_permissions.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_set_permissions.cwl/instance-7tip6l79 with job batch system ID: 2 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:37.444971086Z e11a4c94c91f 2022-07-08 20:04:37,444 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_get_submission.cwl/instance-4gxugrhc with job batch system ID: 3 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:38.006872712Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpgg3yuipp/worker_log.txt
STDERR: 2022-07-08T20:04:38.069551775Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpn6u47sra/worker_log.txt
STDERR: 2022-07-08T20:04:38.310168271Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpn25pl01m/worker_log.txt
STDERR: 2022-07-08T20:04:40.535085438Z e11a4c94c91f 2022-07-08 20:04:40,534 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/set_permissions.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_set_permissions.cwl/instance-7tip6l79
STDERR: 2022-07-08T20:04:41.021580539Z e11a4c94c91f 2022-07-08 20:04:41,021 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-7ycdzvrd
STDERR: 2022-07-08T20:04:41.102987356Z e11a4c94c91f 2022-07-08 20:04:41,102 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_get_submission.cwl/instance-4gxugrhc
STDERR: 2022-07-08T20:04:41.103430996Z e11a4c94c91f 2022-07-08 20:04:41,103 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_validate.cwl/instance-kgcg_oyl with job batch system ID: 4 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:41.599327283Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpchvgztjr/worker_log.txt
STDERR: 2022-07-08T20:04:43.687553855Z e11a4c94c91f 2022-07-08 20:04:43,686 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_validate.cwl/instance-kgcg_oyl
STDERR: 2022-07-08T20:04:43.688378393Z e11a4c94c91f 2022-07-08 20:04:43,687 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/validate_email.cwl' python3 kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_validate_email.cwl/instance-r136gkl5 with job batch system ID: 5 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:43.688401488Z e11a4c94c91f 2022-07-08 20:04:43,687 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-duy52yxb with job batch system ID: 6 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:44.183324115Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpd3l7h2hr/worker_log.txt
STDERR: 2022-07-08T20:04:44.225309710Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmphyjbulya/worker_log.txt
STDERR: 2022-07-08T20:04:46.526167320Z e11a4c94c91f 2022-07-08 20:04:46,525 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-duy52yxb
STDERR: 2022-07-08T20:04:46.607673931Z e11a4c94c91f 2022-07-08 20:04:46,607 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/validate_email.cwl' python3 kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_validate_email.cwl/instance-r136gkl5
STDERR: 2022-07-08T20:04:46.608004784Z e11a4c94c91f 2022-07-08 20:04:46,607 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/check_status.cwl' kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_check_status.cwl/instance-r1823k5v with job batch system ID: 7 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:47.163529039Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmp7ukg3d3c/worker_log.txt
STDERR: 2022-07-08T20:04:47.373841253Z e11a4c94c91f 2022-07-08 20:04:47,373 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/check_status.cwl' kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_check_status.cwl/instance-r1823k5v
STDERR: 2022-07-08T20:04:47.374316176Z e11a4c94c91f 2022-07-08 20:04:47,374 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score.cwl' score.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score.cwl/instance-_5q9fwl_ with job batch system ID: 8 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:04:47.864150400Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmprsekczro/worker_log.txt
STDERR: 2022-07-08T20:06:08.958331039Z e11a4c94c91f 2022-07-08 20:06:08,957 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score.cwl' score.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score.cwl/instance-_5q9fwl_
STDERR: 2022-07-08T20:06:08.958951976Z e11a4c94c91f 2022-07-08 20:06:08,958 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-5dxbyvjm with job batch system ID: 9 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:08.959056094Z e11a4c94c91f 2022-07-08 20:06:08,958 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score_email.cwl' python3 kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score_email.cwl/instance-37ftlp89 with job batch system ID: 10 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:09.549605499Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpo44d__54/worker_log.txt
STDERR: 2022-07-08T20:06:09.634128702Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpt8wjoolq/worker_log.txt
STDERR: 2022-07-08T20:06:11.894892400Z e11a4c94c91f 2022-07-08 20:06:11,894 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-5dxbyvjm
STDERR: 2022-07-08T20:06:12.646422775Z e11a4c94c91f 2022-07-08 20:06:12,646 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score_email.cwl' python3 kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score_email.cwl/instance-37ftlp89
STDERR: 2022-07-08T20:06:12.646774931Z e11a4c94c91f 2022-07-08 20:06:12,646 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/check_status.cwl' kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_check_status.cwl/instance-956lse8o with job batch system ID: 11 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:13.195996674Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmp0eo_nfq0/worker_log.txt
STDERR: 2022-07-08T20:06:13.428949905Z e11a4c94c91f 2022-07-08 20:06:13,428 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/check_status.cwl' kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_check_status.cwl/instance-956lse8o
STDERR: 2022-07-08T20:06:13.429350403Z e11a4c94c91f 2022-07-08 20:06:13,429 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-5dxbyvjm with job batch system ID: 12 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:13.429449131Z e11a4c94c91f 2022-07-08 20:06:13,429 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score_email.cwl' python3 kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score_email.cwl/instance-37ftlp89 with job batch system ID: 13 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:13.929985343Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpypz9_rh_/worker_log.txt
STDERR: 2022-07-08T20:06:13.951065050Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpbhts18ky/worker_log.txt
STDERR: 2022-07-08T20:06:14.057584388Z e11a4c94c91f 2022-07-08 20:06:14,057 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-5dxbyvjm
STDERR: 2022-07-08T20:06:14.067672900Z e11a4c94c91f 2022-07-08 20:06:14,067 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score_email.cwl' python3 kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score_email.cwl/instance-37ftlp89
STDERR: 2022-07-08T20:06:14.068007179Z e11a4c94c91f 2022-07-08 20:06:14,067 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score.cwl' score.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score.cwl/instance-_5q9fwl_ with job batch system ID: 14 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:14.663291404Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmp819e6q9d/worker_log.txt
STDERR: 2022-07-08T20:06:14.753979963Z e11a4c94c91f 2022-07-08 20:06:14,753 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/score.cwl' score.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_score.cwl/instance-_5q9fwl_
STDERR: 2022-07-08T20:06:14.754434124Z e11a4c94c91f 2022-07-08 20:06:14,754 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/check_status.cwl' kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_check_status.cwl/instance-r1823k5v with job batch system ID: 15 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:15.256016238Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpsdtr7ff5/worker_log.txt
STDERR: 2022-07-08T20:06:15.358503803Z e11a4c94c91f 2022-07-08 20:06:15,358 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/check_status.cwl' kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_check_status.cwl/instance-r1823k5v
STDERR: 2022-07-08T20:06:15.358885928Z e11a4c94c91f 2022-07-08 20:06:15,358 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/validate_email.cwl' python3 kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_validate_email.cwl/instance-r136gkl5 with job batch system ID: 16 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:15.359009964Z e11a4c94c91f 2022-07-08 20:06:15,358 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-duy52yxb with job batch system ID: 17 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:15.861062058Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpj60v_qyt/worker_log.txt
STDERR: 2022-07-08T20:06:15.902363066Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmp25p83mou/worker_log.txt
STDERR: 2022-07-08T20:06:16.003241125Z e11a4c94c91f 2022-07-08 20:06:16,002 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/validate_email.cwl' python3 kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_validate_email.cwl/instance-r136gkl5
STDERR: 2022-07-08T20:06:16.013844124Z e11a4c94c91f 2022-07-08 20:06:16,013 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_annotate_submission.cwl/instance-duy52yxb
STDERR: 2022-07-08T20:06:16.014260490Z e11a4c94c91f 2022-07-08 20:06:16,014 MainThread INFO toil.leader: Issued job 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_validate.cwl/instance-kgcg_oyl with job batch system ID: 18 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:16.592177645Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpd44r9vl4/worker_log.txt
STDERR: 2022-07-08T20:06:16.690286547Z e11a4c94c91f 2022-07-08 20:06:16,689 MainThread INFO toil.leader: Job ended: 'file:///var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/brats-dream-challenge-infra-main/steps/validate.cwl' validate.py kind-file_var_lib_docker_volumes_workflow_orchestrator_shared__data_1d52d173-f677-4442-822a-6827cb7f7a90_brats-dream-challenge-infra-main_steps_validate.cwl/instance-kgcg_oyl
STDERR: 2022-07-08T20:06:16.690751891Z e11a4c94c91f 2022-07-08 20:06:16,690 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_get_submission.cwl/instance-4gxugrhc with job batch system ID: 19 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:16.690877850Z e11a4c94c91f 2022-07-08 20:06:16,690 MainThread INFO toil.leader: Issued job 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-7ycdzvrd with job batch system ID: 20 and cores: 1, disk: 1.0 G, and memory: 100.0 M
STDERR: 2022-07-08T20:06:17.197276198Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpiu33tsjp/worker_log.txt
STDERR: 2022-07-08T20:06:17.230453942Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmprdlhrm8r/worker_log.txt
STDERR: 2022-07-08T20:06:17.317380418Z e11a4c94c91f 2022-07-08 20:06:17,316 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks-Workflows/cwl-tool-synapseclient/v1.4/cwl/synapse-get-tool.cwl#synapse-get' synapse kind-https_raw.githubusercontent.com_Sage-Bionetworks-Workflows_cwl-tool-synapseclient_v1.4_cwl_synapse-get-tool.cwl_synapse-get/instance-7ycdzvrd
STDERR: 2022-07-08T20:06:17.337440803Z e11a4c94c91f 2022-07-08 20:06:17,337 MainThread INFO toil.leader: Job ended: 'https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/get_submission.cwl' challengeutils kind-https_raw.githubusercontent.com_Sage-Bionetworks_ChallengeWorkflowTemplates_v3.1_cwl_get_submission.cwl/instance-4gxugrhc
STDERR: 2022-07-08T20:06:17.918668593Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmpbadl431q/worker_log.txt
STDERR: 2022-07-08T20:06:18.540573388Z INFO:toil.worker:Redirecting logging to /var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/node-9f845868-a3f3-47ac-941d-3ccfe9ce26c6-1cc402dd0e11d5ae18db04a6de87223d/tmp9n2xnwzi/worker_log.txt
STDERR: 2022-07-08T20:06:19.772586901Z e11a4c94c91f 2022-07-08 20:06:19,772 MainThread INFO toil.leader: Finished toil run successfully.
STDERR: 2022-07-08T20:06:19.794671983Z e11a4c94c91f 2022-07-08 20:06:19,794 MainThread INFO toil.common: Successfully deleted the job store: FileJobStore(/var/lib/docker/volumes/workflow_orchestrator_shared/_data/1d52d173-f677-4442-822a-6827cb7f7a90/tmp_8kq30yq)
STDOUT: 2022-07-08T20:06:20.046201597Z {}
Created by Yunan Wu ywu2168 @ywu2168 ,
Thank you for attaching your TOIL logs. For future reference, these are more helpful for when the submission status comes back as INVALID. For your submissions, they were evaluated successfully (from the [Submission Dashboard](https://www.synapse.org/#!Synapse:syn27046444/wiki/616999), you should see their statuses are ACCEPTED).
Regarding your scores of 0s, it is most likely due to your predictions not being compatible with the references, thus no score can be produced. This could be a mismatch in origin, size, or orientation. You can verify this information by visualizing your predictions in CaPTk (https://cbica.github.io/CaPTk/).
Hope this helps!