effect allele of an eQTL (syn4622659)

Hi Mette, For the eQTL data (syn4622659), I wonder whether SNP_allele1 of an eQTL is the effect allele (i.e., coding allele). Thank you in advance. Ting

Created by uqtqi2
Allele 1 is the effect allele in those analyses. In other words, when beta is positive, carrying more copies of allele 1 is associated with higher expression. I hope that helps.

Your web browser must have JavaScript enabled in order for this application to display correctly.
If you are an automated web crawler from a search engine, follow this AJAX application crawl link

Hi Mette, For the eQTL data (syn4622659), I wonder whether SNP_allele1 of an eQTL is the effect allele (i.e., coding allele). Thank you in advance. Ting

Drop files to upload

effect allele of an eQTL (syn4622659) page is loading…