I am looking only for the genotype level (AA, AB, BB (0, 1, 2) for each SNP and sample) in CommonMind and in PsychENCODE (not the CEL raw files). Are these SNP matrices available (each row is a SNP (rsID) and each column is a sample)?
Created by Assif Yitzhaky assify Thanks. What about PsychENCODE? The genotype data for the CMC release is available as iDAT, plink, and imputed files