I count 903,879 emtpy reads in sim32_mergeSort_1.fq
The first example is read `@1000` on line 17.
In context:
```
@100
CAGGCCCAGCGTTGTGATGGAGTAAATGACTGCTTTGATGAAAGTGATGAACTGTTTTGCGTGAGCCCTCAACCTGCCTGCAATACCAGCTCCTTCAGGC
+
CDCCCC@@DDEDDEEGFFFEDDDDDFGIIIJGHJJGGFHHJJJHCB98@88=@BDCEEDDDDDDDDDBB@@C?CDBBBDDDDD31?@FFFFGIIHHHHFA
@1000
+
C
@10000
CACCTCCCTGGACACTCTGTCTCTGGCTTCTTTCTGCCTAGCTCATCTCTAGCCAATCTTACAGTTATATATCTTAAGCCCTCTTCTCTTTGTTCTTTAA
+
CCCACDDDDDDDBDDDDDDBBBFFFHIJIIGEHHBBBCFFFFFDGICreated by Jeltje van Baren jeltje Revised sim32 dataset has been posted to the Google bucket gs://dream-smc-rna/training/. Dear Jeltje and Jeff,
Apologies, this is a known problem that was corrected earlier in the simulation procedure. Unfortunately, sim32 missed the correction. We will post a revised dataset for sim32 very shortly. I can confirm the problem with sim32 having many blank reads as well. Other FASTQs do not have this problem.
Drop files to upload
sim32 dataset contains many bogus reads page is loading…