It appears that the data resources used in the example workflows are stored in the synData repository and referenced in the cwl workflow like so:
hints:
- class: synData
input: index
entity: syn6037390
The files show up here: https://www.synapse.org/#!Synapse:syn2813589/files/
If I have custom data resources to include beyond what's already available, is there a way I can upload them into the synData repo or is there some other way I can reference these if they're in a google cloud bucket?
Created by Brian Haas bhaas I uploaded my reference tarred file into my synapse project. I shared this file with two challenge team members but I am not sure if they are also in the admin team. Would you clarify this access permission process?
Thanks, Verified - I created my own synapse project, uploaded data (by just linking it in Synapse to a public URL), and then I could use the Synapse ID in the hints section.
thanks! From Thomas in a direct email:
You should upload a zipped or tarred file of your reference files into your own synapse project. You will have to give us (the challenge team admins) permissions to view the project/reference files so that dream_runner.py can download it when we run your workflow.
Sorry if this is unclear, am currently travelling and dont have computer access.
Best,
Thomas
Drop files to upload
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