icNF04.9a.markdup.sorted.bam

syn29532286

Created By Robert Allaway allawayr

age: 24
sex: Female
assay: RNA-seq
tissue: primary tumor
ageUnit: years
species: Homo sapiens
studyId: syn11374339
cellType: schwann
dataType: AlignedReads
platform: Illumina NovaSeq 6000
workflow: STAR and Salmon
aliquotID: s13_rna.tctggataag-gaaggagcct.hc5gydsx3_tctggataag-gaaggagcct_l002
diagnosis: Neurofibromatosis type 1
studyName: Genetic Studies of Neurofibromatosis
tumorType: Cutaneous Neurofibroma
fileFormat: bam
initiative: Cutaneous Neurofibroma Initiative
specimenID: icNF04.9a
totalReads: 74962025
dataSubtype: processed
nf1Genotype: -/-
nf2Genotype: Unknown
individualID: UF1313
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
fundingAgency: NTAP
modelSystemName: icNF04.9a
genomicReference: GRCh38
parentSpecimenID: UF1313 T1
averageInsertSize: 1240.5
averageReadLength: 139
averageBaseQuality: 35.8
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 28.6265772569511
specimenPreparationMethod: Fresh collected

icNF04.9a.markdup.sorted.bam page is loading…