hTERT_NF1_ipNF95.6.markdup.sorted.bam
syn29532597
Created By
Robert Allaway allawayr
age: 6
sex: Male
assay: RNA-seq
tissue: primary tumor
ageUnit: years
species: Homo sapiens
studyId: syn11374339
cellType: schwann
dataType: AlignedReads
platform: Illumina NovaSeq 6000
workflow: STAR and Salmon
aliquotID: s2_rna.cacagccaac-taacaccggc.hc5gydsx3_cacagccaac-taacaccggc_l002
diagnosis: Neurofibromatosis type 1
studyName: Genetic Studies of Neurofibromatosis
tumorType: Plexiform Neurofibroma
fileFormat: bam
initiative: Cutaneous Neurofibroma Initiative
specimenID: hTERT NF1 ipNF95.6
totalReads: 75100217
dataSubtype: processed
nf1Genotype: -/-
nf2Genotype: Unknown
individualID: PN10
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
fundingAgency: NTAP
modelSystemName: hTERT NF1 ipNF95.6
genomicReference: GRCh38
parentSpecimenID: PN10
averageInsertSize: 1324.4
averageReadLength: 140
averageBaseQuality: 35.8
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 33.5587019675323
specimenPreparationMethod: Fresh collected
Drop files to upload
Your web browser must have JavaScript enabled in order for this application to display correctly.
If you are an automated web crawler from a search engine, follow this
AJAX application crawl link
hTERT_NF1_ipNF95.6.markdup.sorted.bam
page is loading…