Hi there,
I work at a startup, meaning we do not have access to ICGC-DACO or eRA. I am trying to access the synthetic data. One of the Wiki pages says that this is possible for me:
https://www.synapse.org/#!Synapse:syn312572/wiki/60702
"No ICGC approval is required to access simulated tumour and normal #1, #2, #3 and #6."
However, Gene Torrent download to our compute resource does not work, according to https://www.synapse.org/#!Synapse:syn312572/wiki/60898
Is there any way left for me to download the data?
Thanks!
Simon
Created by Simon sbrunner By the way, in the Google Cloud Storage folder gs://public-dream-data/
listed here:
http://googlegenomics.readthedocs.io/en/latest/use_cases/discover_public_data/dream_smc_dna.html
There they seem to have synthetic.challenge.set 1-3. I didn't see 6 there. Same here.
I ran the commandline: synapse get -r syn2280639
and got:
SynapseHTTPError: 405 Client Error: Method Not Allowed
WebServices 3.012017-05-25 18:25:04Please use POST, not GET, for this URL.The action cannot be completed.Please refer to the User Guide for the correct API call for downloads. Hi, wondering the same thing. I'm unable to use synapse to download any of the data. This is the error I get using the python API:
SynapseHTTPError: 405 Client Error: Method Not Allowed
WebServices 3.012017-05-11 17:19:42Please use POST, not GET, for this URL.The action cannot be completed.Please refer to the User Guide for the correct API call for downloads. Hi Simon, have you downloaded the bam files of #1 2 3 6? I also try to download these files but have not found a way.
Best, Chen