nd_24h_r2_R2.fastq.gz
syn31488544
Created By
Ana Calizo ana.calizo
age: <5
sex: Male
Uuid: cecdafd4-9831-445d-8eb3-9ba878066697
assay: RNA-seq
organ:
tissue:
ageUnit: years
runType: pairedEnd
species: Homo sapiens
studyId: syn21984813
cellType:
comments:
dataType: geneExpression
entityId: syn31488544
platform: Illumina NovaSeq 6000
readPair: 2
Component: GenomicsAssayTemplate
aliquotID:
diagnosis: Neurofibromatosis type 1
readDepth:
studyName: Predictive Modeling Utilizing a Preclinical NF1-MPNST Platform Suitable for Precision Oncology
timePoint: 24
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: fastq
initiative: MPNST Patient-Derived Model Centers
isCellLine: Yes
isStranded: Yes
readLength:
specimenID: JH-2-002-CL
dataSubtype: raw
libraryPrep: rRNAdepletion
nf1Genotype: -/-
nf2Genotype: +/+
compoundName: nodrug= DMSO
individualID: JH-2-002
resourceType: experimentalData
fundingAgency: NFRI,NIH-NCI
isPrimaryCell: No
timePointUnit: hours
modelSystemName: JH-2-002-CL
parentSpecimenID: JH-2-002-CL
readStrandOrigin: reverse
nucleicAcidSource: bulk cell
dissociationMethod:
readPairOrientation:
progressReportNumber:
experimentalCondition: treated for 24 hours
libraryPreparationMethod: TruSeq
specimenPreparationMethod:
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