GSM5429602

syn33395701

Created By Robert Allaway allawayr

age:
sex:
Uuid: ab8c3359-2a16-430d-a81d-0ef5bdb838b9
assay: ATAC-seq
organ:
tissue:
ageUnit:
runType: pairedEnd
species: Homo sapiens
studyId: syn11681835
cellType:
comments: https://www.ncbi.nlm.nih.gov/sra?term=SRX11376893
dataType: chromatinActivity
entityId: syn33395701
platform: Illumina HiSeq 2500
readPair:
Component: GenomicsAssayTemplateExtended
aliquotID:
diagnosis: Neurofibromatosis type 1
readDepth:
studyName: Novel therapeutic development of NF1-associated malignant peripheral nerve sheath tumor (MPNST)
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: fastq
initiative: Francis S. Collins Scholars Program
isCellLine:
isStranded:
readLength: 100
specimenID: M3_sgCon_rep1
dataSubtype: raw
libraryPrep:
nf1Genotype: -/-
nf2Genotype: Unknown
individualID: M3_sgCon_rep1
resourceType: experimentalData
fundingAgency: NTAP
genePerturbed:
isPrimaryCell:
timePointUnit:
modelSystemName: M3 MPNST
parentSpecimenID:
readStrandOrigin:
nucleicAcidSource: bulk cell
dissociationMethod: none
readPairOrientation:
genePerturbationType: non-targeting control
progressReportNumber: 6
experimentalCondition: PBS
experimentalTimepoint: 24
libraryPreparationMethod:
specimenPreparationMethod: Fresh collected
genePerturbationTechnology: CRISPR

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