GSM5429649

syn33395955

Created By Robert Allaway allawayr

age:
sex:
Uuid: ec2f8b87-d941-42c5-a36e-cf946eafa6c0
assay: RNA-seq
organ: mammary gland
tissue: CDX tissue
ageUnit:
runType: pairedEnd
species: Homo sapiens
studyId: syn11681835
cellType:
comments: https://www.ncbi.nlm.nih.gov/sra?term=SRX11377290
dataType: geneExpression
entityId: syn33395955
platform: Illumina HiSeq 2500
readPair:
Component: GenomicsAssayTemplateExtended
aliquotID:
diagnosis:
readDepth:
studyName: Novel therapeutic development of NF1-associated malignant peripheral nerve sheath tumor (MPNST)
tumorType:
fileFormat: fastq
initiative: Francis S. Collins Scholars Program
isCellLine: Yes
isStranded:
readLength: 100
specimenID: AT3 sgEed-2 tumor 1
dataSubtype: raw
libraryPrep:
nf1Genotype: +/+
nf2Genotype:
individualID: AT3 sgEed-2 tumor 1
resourceType: experimentalData
fundingAgency: NTAP
genePerturbed: EED
isPrimaryCell: Yes
timePointUnit:
modelSystemName: C57BL/6J
parentSpecimenID:
readStrandOrigin:
nucleicAcidSource:
dissociationMethod:
readPairOrientation:
transplantationType: xenograft
genePerturbationType: knockout
progressReportNumber: 6
experimentalCondition:
experimentalTimepoint:
libraryPreparationMethod:
specimenPreparationMethod: Flash frozen
genePerturbationTechnology: CRISPR
transplantationRecipientSpecies: Mus musculus

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