GSM5420928

syn33396137

Created By Robert Allaway allawayr

age:
sex: Unknown
Uuid: ff218aff-5b0c-4154-b529-d8d15bfb583c
assay: ChIP-seq
organ:
tissue:
ageUnit:
runType: pairedEnd
species: Homo sapiens
studyId: syn11681835
cellType:
comments: https://www.ncbi.nlm.nih.gov/sra?term=SRX11364732
dataType: chromatinActivity
entityId: syn33396137
platform: Illumina HiSeq 2500
readPair:
Component: GenomicsAssayTemplateExtended
aliquotID:
diagnosis: Neurofibromatosis type 1
readDepth:
studyName: Novel therapeutic development of NF1-associated malignant peripheral nerve sheath tumor (MPNST)
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: fastq
initiative: Francis S. Collins Scholars Program
isCellLine: Yes
isStranded:
readLength: 50
specimenID: sgSUZ12_Vehicle_Input
dataSubtype: raw
libraryPrep:
nf1Genotype: -/-
nf2Genotype: Unknown
individualID: sgSUZ12_Vehicle_Input
resourceType: experimentalData
fundingAgency: NTAP
genePerturbed: SUZ12
isPrimaryCell: No
timePointUnit: days
modelSystemName: M3 MPNST
parentSpecimenID:
readStrandOrigin:
nucleicAcidSource: bulk cell
dissociationMethod:
readPairOrientation:
genePerturbationType: knockout
progressReportNumber: 6
experimentalCondition: Vehicle (DMSO)
experimentalTimepoint: 5
libraryPreparationMethod:
specimenPreparationMethod: Fresh collected
genePerturbationTechnology: CRISPR

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