5451-GABA-OX_CTCGAACA_H3FVFDSX2_L004_001.R1.fastq.gz
syn34585473
Created By
Jofan Chien jofan
assay: oxBS-Seq
grant: U01MH122591, U01MH122592, U01MH122590
organ: brain
study: NeuMet
tissue: dorsolateral prefrontal cortex
runType: pairedEnd
species: Human
cellType: GABAergic neurons
dataType: epigenetics
organRIN: 7.9
platform: IlluminaNovaseq6000
libraryID: 5451-GABA-OX_CTCGAACA_H3FVFDSX2_L004.R1
pcrCycles: 151
consortium: PEC
fileFormat: fastq
isStranded: TRUE
readLength: 150
specimenID: 5451-DNA-GABA-OX
totalReads: 54108027
dataSubtype: raw
libraryPrep: methylSeq
BrodmannArea: BA 9
individualID: 5451
isPostMortem: TRUE
meanCoverage: 2.70540135
metadataType:
referenceSet: GRCh38
resourceType: experimentalData
lambdaDNAconc: 0
isMultiSpecimen: FALSE
samplingAgeUnits: years
isMultiIndividual: FALSE
nucleicAcidSource: sorted nuclei
directionalBSseqLibrary: TRUE
libraryPreparationMethod: Ultralow Methyl-Seq
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