PN19.markdup.sorted.bam

syn34723743

Created By Robert Allaway allawayr

sex: Male
assay: RNA-seq
tissue: primary tumor
species: Homo sapiens
dataType: AlignedReads
platform: Illumina HiSeq 2500
workflow: STAR and Salmon
Component: RNASeqTemplate
aliquotID: PN19_lib
diagnosis: Neurofibromatosis type 1
tumorType: Plexiform Neurofibroma
fileFormat: bam
isCellLine: No
specimenID: PN19
totalReads: 80194177
dataSubtype: processed
individualID: SRP258993_63
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
isPrimaryCell: No
genomicReference: GRCh38
averageInsertSize: 1837
averageReadLength: 124
averageBaseQuality: 36.4
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 22.6422474539517

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