PN15.markdup.sorted.bam
syn34725203
Created By
Robert Allaway allawayr
sex: Female
assay: RNA-seq
tissue: primary tumor
species: Homo sapiens
dataType: AlignedReads
platform: Illumina HiSeq 2000
workflow: STAR and Salmon
Component: RNASeqTemplate
aliquotID: PN15_lib
diagnosis: Neurofibromatosis type 1
tumorType: Plexiform Neurofibroma
fileFormat: bam
isCellLine: No
specimenID: PN15
totalReads: 93394762
dataSubtype: processed
individualID: SRP258993_60
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
isPrimaryCell: No
genomicReference: GRCh38
averageInsertSize: 1529.2
averageReadLength: 99
averageBaseQuality: 35.6
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 22.6467400816333
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