S2W7654T.markdup.sorted.bam

syn38870095

Created By Robert Allaway allawayr

sex: Female
assay: RNA-seq
tissue: primary tumor
species: Homo sapiens
dataType: AlignedReads
platform: Illumina HiSeq 4000
workflow: STAR and Salmon
Component: RNASeqTemplate
diagnosis: Not Applicable
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: bam
isCellLine: No
specimenID: S2W7654T
totalReads: 159411
dataSubtype: processed
individualID: WUS_007
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
isPrimaryCell: No
genomicReference: GRCh38
parentSpecimenID: WUS_007_N_01_RNA
averageInsertSize: 2691.5
averageReadLength: 100
averageBaseQuality: 36.1
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 37.1298091097854
specimenPreparationMethod: Flash frozen

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