S61S912U.markdup.sorted.bam
syn38871599
Created By
Robert Allaway allawayr
sex: Female
assay: RNA-seq
tissue: primary tumor
species: Homo sapiens
dataType: AlignedReads
platform: Illumina HiSeq 4000
workflow: STAR and Salmon
Component: RNASeqTemplate
diagnosis: Not Applicable
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: bam
isCellLine: No
specimenID: S61S912U
totalReads: 83464331
dataSubtype: processed
individualID: ROY_047
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
isPrimaryCell: No
genomicReference: GRCh38
parentSpecimenID: ROY_047_N_01_R1_RNA
averageInsertSize: 1522.4
averageReadLength: 100
averageBaseQuality: 36.2
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 33.9746388190663
specimenPreparationMethod: Flash frozen
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