S77I1ONF.markdup.sorted.bam

syn38875061

Created By Robert Allaway allawayr

sex: Female
assay: RNA-seq
tissue: recurrent tumor
species: Homo sapiens
dataType: AlignedReads
platform: Illumina HiSeq 4000
workflow: STAR and Salmon
Component: RNASeqTemplate
diagnosis: Not Applicable
tumorType: Malignant Peripheral Nerve Sheath Tumor
fileFormat: bam
isCellLine: No
specimenID: S77I1ONF
totalReads: 51170178
dataSubtype: processed
individualID: MOF_005
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
isPrimaryCell: No
genomicReference: GRCh38
parentSpecimenID: MOF_005_N_02_R2_RNA
averageInsertSize: 1233.5
averageReadLength: 99
averageBaseQuality: 37.4
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 23.5502893892611
specimenPreparationMethod: Flash frozen

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