Hi.
Ever since I got 'submission failed: Row id: 25 has been changed since last read. Please get the latest value for this row and then attempt to update it again.' email (this job was terminated),
I haven't got any notification emails from synapse. I tried to run a docker that runs a really simple python program and it's hanging for more than a day.
Thanks.
Created by Seung Wook Kim swkim All: There's a small bug in the job display table that I think is causing a lot of confusion: When a job is "pending" then it shows as "Running" in this table. When you cancel it is appears to you that it is running for a long time until canceled but actually it never started running. We will update the display so it (correctly) shows your job as Pending rather than Running. Same problem for me. I am no longer receiving any notification mails after submitting images to processing queue. Is there a way to check the status of a job on synapse, in the absence of notification emails providing links to the log files?
Thanks
Prasad > Could you please take a look at this issue? It takes more than 12 hours to kill a running job that's supposed to run for 2 seconds(just checking file names in directories) and it seems like the job doesn't run at all - I don't get any logs.
@brucehoff Bruce, can you have a look at this? Thanks! Hi,
I am facing similar issues.
It started with a submit including a preprocessing stage. Only a link to the log-file of the second-container was sent via e-mail.
It got worse, with the last submission I had running. It randomly stopped updating the log-file, way before reaching the 1mb limit.
The wiki showed, that the job was still running. I cancelled it now, after a few days without log-file updates.
By now it is quite impossible to work with synapse. I do not get any notifications of synapse whatsoever.
Neither that a job started running, finished, or that log-files are available.
This makes working with synapse impossible, and I am hoping for a quick fix.
Best,
David
@tschaffter
Could you please take a look at this issue? It takes more than 12 hours to kill a running job that's supposed to run for 2 seconds(just checking file names in directories) and it
seems like the job doesn't run at all - I don't get any logs.
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