swn_patient_38_tumor_90.markdup.sorted.bam
syn43601913
Created By
Robert Allaway allawayr
sex: Male
assay: RNA-seq
organ: nerves
tissue: primary tumor
species: Homo sapiens
studyId: syn9727752
dataType: AlignedReads
platform: Illumina HiSeq 2000
workflow: STAR and Salmon
Component: GenomicsAssayTemplate
diagnosis: Schwannomatosis
studyName: Synodos Schwannomatosis
tumorType: Schwannoma
fileFormat: bam
initiative: Synodos
isCellLine: No
specimenID: swn_patient_38_tumor_90
totalReads: 85126545
dataSubtype: processed
individualID: swn_patient_38
resourceType: experimentalData
workflowLink: https://nf-co.re/rnaseq/3.7/output#star-and-salmon
fundingAgency: CTF
isPrimaryCell: No
genomicReference: GRCh38
averageInsertSize: 1083.7
averageReadLength: 74
averageBaseQuality: 34.2
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 41.8767964798759
Drop files to upload
Your web browser must have JavaScript enabled in order for this application to display correctly.
If you are an automated web crawler from a search engine, follow this
AJAX application crawl link
swn_patient_38_tumor_90.markdup.sorted.bam
page is loading…