Hello,
I was submitting our docker image, but I received the below error message (in the log file):
Traceback (most recent call last):
STDERR: 2023-09-15T18:00:24.262022493Z | File "/usr/local/lib/python3.8/site-packages/cwltool/process.py", line 454, in fill_in_defaults
STDERR: 2023-09-15T18:00:24.262024725Z | @ raise WorkflowException(
STDERR: 2023-09-15T18:00:24.262026753Z |cwltool.errors.WorkflowException: Missing required input parameter 'input_file'
And the following warning message on top of it:
STDERR: 2023-09-15T18:00:17.033877125Z 3a45587785a6 2023-09-15 18:00:17,033 MainThread WARNING cwltool: Workflow checker warning:
STDERR: 2023-09-15T18:00:17.033907161Z CMRxRecon-Task1-Valid-master/workflow.cwl:49:9: Source 'filepath' of type ["null", "File"] may be
STDERR: 2023-09-15T18:00:17.033910494Z incompatible
STDERR: 2023-09-15T18:00:17.033912891Z CMRxRecon-Task1-Valid-master/workflow.cwl:59:9: with sink 'input_file' of type "File"
The docker image works fine on the local machine. I cannot figure out the reason for docker submission failing. The Submission ID is 9740796. Can you give me any guidance?
Thanks